STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Ping_3025TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: ppr:PBPRA3185 putative ammonium transporter; TC 1.A.11. (406 aa)    
Predicted Functional Partners:
Ping_3026
PFAM: nitrogen regulatory protein P-II; KEGG: sdn:Sden_2905 nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 0.998
Ping_3267
PFAM: nitrogen regulatory protein P-II; KEGG: cps:CPS_3917 Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 0.995
Ping_1007
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: ppr:PBPRA0542 putative glutamate synthase, large subunit.
 
  
 0.866
Ping_2308
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: noc:Noc_0226 PAS sensor diguanylate cyclase and phophodiesterase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
      0.846
Ping_2916
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: vpa:VPA0878 hypothetical protein.
 
      0.782
Ping_3487
PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; SMART: PAS domain containing protein; KEGG: vpa:VP0119 nitrogen regulation protein.
 
 
 0.749
Ping_1222
KEGG: vpa:VP0813 putative nitrogen regulatory protein P-II family protein.
  
 
 0.727
Ping_2730
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rfr:Rfer_1021 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
      0.511
Ping_3484
KEGG: vch:VC2746 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp.
  
  
 0.498
Ping_1562
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rfr:Rfer_1021 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
      0.482
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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