STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_3084KEGG: abo:ABO_1996 hypothetical protein. (296 aa)    
Predicted Functional Partners:
Ping_1493
PFAM: regulatory protein, TetR; KEGG: cps:CPS_0335 transcriptional regulator, TetR family.
  
     0.653
Ping_0194
PFAM: phospholipid/glycerol acyltransferase; KEGG: she:Shewmr4_3788 glycerol-3-phosphate O-acyltransferase; Belongs to the GPAT/DAPAT family.
  
     0.545
Ping_0888
PFAM: Rhomboid family protein; KEGG: cps:CPS_2148 membrane protein, Rhomboid family.
  
     0.462
Ping_0544
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sdn:Sden_3495 regulatory protein, LysR; Belongs to the LysR transcriptional regulatory family.
  
     0.427
Ping_0096
TIGRFAM: general secretion pathway protein C; PFAM: PDZ/DHR/GLGF domain protein; KEGG: sfr:Sfri_0104 general secretion pathway protein C.
  
     0.400
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.