STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_3105KEGG: ava:Ava_3495 Tn7-like transposition protein D. (535 aa)    
Predicted Functional Partners:
Ping_3109
KEGG: pca:Pcar_2932 transposon Tn7 transposition protein TnsA.
 
   
 0.957
Ping_3107
KEGG: bca:BCE0176 Tn7-like transposition protein C.
 
   
 0.953
Ping_3108
Transposon Tn7 transposition protein B; KEGG: ssn:SSO_3892 putative transposase.
 
   
 0.952
Ping_3106
KEGG: ava:Ava_3489 Tn7-like transposition protein D.
       0.773
Ping_1823
KEGG: pat:Patl_3555 hypothetical protein.
  
     0.599
Ping_0553
Maltoporin; KEGG: vvy:VVA0142 maltoporin.
  
     0.515
Ping_2650
KEGG: sdn:Sden_0766 ammonium transporter; TIGRFAM: PAS sensor protein; diguanylate cyclase; ammonium transporter; PFAM: GGDEF domain containing protein; EAL domain protein; Rh family protein/ammonium transporter; PAS fold domain protein; SMART: PAS domain containing protein; TC 1.A.11.
  
     0.463
Ping_1474
PFAM: porin, Gram-negative type; KEGG: vvy:VV2720 outer membrane protein OmpU.
  
     0.458
Ping_1735
KEGG: ppr:PBPRB1261 hypothetical protein.
  
     0.440
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.