STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_3108Transposon Tn7 transposition protein B; KEGG: ssn:SSO_3892 putative transposase. (735 aa)    
Predicted Functional Partners:
Ping_3107
KEGG: bca:BCE0176 Tn7-like transposition protein C.
 
 
 0.975
Ping_3109
KEGG: pca:Pcar_2932 transposon Tn7 transposition protein TnsA.
 
  
 0.968
Ping_3105
KEGG: ava:Ava_3495 Tn7-like transposition protein D.
 
     0.955
Ping_3106
KEGG: ava:Ava_3489 Tn7-like transposition protein D.
       0.773
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.