STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_3145ADP-ribose pyrophosphatase; PFAM: NUDIX hydrolase; KEGG: psp:PSPPH_4558 MutT domain protein-like. (251 aa)    
Predicted Functional Partners:
Ping_1673
PFAM: peptidase C1A, papain; KEGG: dre:368704 cathepsin C.
  
     0.746
rplT
LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
     0.607
Ping_3356
2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: gsu:GSU1372 3-hydroxyisobutyrate dehydrogenase family protein.
  
     0.596
Ping_1964
Hypothetical protein; KEGG: gme:Gmet_1851 pentapeptide repeat protein.
  
     0.493
Ping_2708
KEGG: vch:VC1610 hypothetical protein.
  
    0.491
Ping_1749
ATP synthase B subunit (AtpF); KEGG: hsa:26064 retinoic acid induced 14.
  
     0.488
Ping_0374
PFAM: S-adenosylmethionine decarboxylase; KEGG: sdn:Sden_2279 adenosylmethionine decarboxylase.
  
     0.484
Ping_2690
Peptidase; KEGG: pfa:PFD0320c-1 hypothetical protein.
  
     0.447
Ping_0636
Sodium/proton antiporter, CPA1 family; PFAM: cyclic nucleotide-binding; sodium/hydrogen exchanger; KEGG: vvy:VV1429 NhaP-type Na+/H+ and K+/H+ antiporter; TC 2.A.36.
  
     0.443
polA
Fused DNA polymerase 5'->3' exonuclease and 3'->5' polymerase and 3'->5' exonuclease; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
   
 0.442
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.