STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_3166KEGG: vfi:VFA0235 glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (192 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
 
 0.996
Ping_3177
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ppr:PBPRA1100 putative glycerophosphoryl diester phosphodiesterase.
 
 
 0.928
Ping_3232
PFAM: FAD dependent oxidoreductase; KEGG: pat:Patl_3682 FAD dependent oxidoreductase.
  
  
 0.902
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
  
 
 0.866
Ping_0991
PFAM: Calcium-binding EF-hand-containing protein; KEGG: xcb:XC_3100 hypothetical protein.
   
 
 0.814
Ping_2697
PFAM: histone deacetylase superfamily; KEGG: cps:CPS_1655 histone deacetylase family protein.
    
   0.806
Ping_2723
PFAM: peptidase S1 and S6, chymotrypsin/Hap; KEGG: cps:CPS_4627 serine protease, trypsin family.
   
 
 0.780
Ping_3167
Hypothetical protein.
       0.773
Ping_0704
PFAM: protein of unknown function RIO1; protein kinase; protein phosphatase 2C domain protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: dar:Daro_0820 protein kinase:protein phosphatase 2C-like.
    
 
 0.759
Ping_1021
PFAM: protein kinase; SMART: tyrosine protein kinase; protein phosphatase 2C domain protein; serine/threonine protein kinase; KEGG: ppr:PBPRA2520 hypothetical protein.
    
 
 0.759
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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