STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_3177PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ppr:PBPRA1100 putative glycerophosphoryl diester phosphodiesterase. (359 aa)    
Predicted Functional Partners:
Ping_2092
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: vch:VC1554 glycerophosphoryl diester phosphodiesterase, putative.
  
  
0.933
Ping_3166
KEGG: vfi:VFA0235 glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
 
 0.928
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.918
Ping_3290
PFAM: alpha/beta hydrolase fold; KEGG: ppr:PBPRB1931 hypothetical lysophospholipase L2.
    
 0.910
Ping_0276
Ethanolamine ammonia-lyase heavy chain; PFAM: Ethanolamine ammonia lyase large subunit; KEGG: pat:Patl_1427 ethanolamine ammonia lyase large subunit.
     
  0.900
Ping_0277
PFAM: Ethanolamine ammonia-lyase light chain; KEGG: pat:Patl_1428 ethanolamine ammonia-lyase; Belongs to the EutC family.
     
  0.900
Ping_3232
PFAM: FAD dependent oxidoreductase; KEGG: pat:Patl_3682 FAD dependent oxidoreductase.
  
 
 0.652
Ping_1194
KEGG: vpa:VP1943 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 
 0.442
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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