STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_3182Similar to RTX toxin; TIGRFAM: putative outer membrane adhesin like proteiin; KEGG: cch:Cag_1242 VCBS. (3132 aa)    
Predicted Functional Partners:
Ping_0248
PFAM: PKD domain containing protein; Hemolysin-type calcium-binding region; Thrombospondin type 3 repeat; Fibronectin, type III domain protein; KEGG: son:SO4025 OmpA-like transmembrane domain protein.
  
 0.927
Ping_2848
KEGG: rso:RS05070 putative hemagglutinin/hemolysin-related protein.
  
  
  0.914
Ping_2847
KEGG: cps:CPS_4328 cadherin domain protein.
     
  0.900
Ping_3184
PFAM: outer membrane efflux protein; KEGG: pen:PSEEN0747 efflux outer membrane protein.
 
    0.899
Ping_3183
KEGG: pub:SAR11_0933 AcrA-like protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
    0.872
Ping_3181
KEGG: pen:PSEEN0739 hypothetical protein.
 
    0.860
Ping_3180
Peptidase M50; KEGG: pub:SAR11_0935 peptidase M50.
 
    0.844
Ping_1350
PFAM: peptidase M56, BlaR1; KEGG: noc:Noc_0291 hypothetical protein.
  
     0.682
Ping_2395
PFAM: Polypeptide-transport-associated domain protein, ShlB-type; KEGG: cvi:CV1468 probable activation/secretion signal peptide protein.
 
     0.524
Ping_1811
S-adenosylmethionine-dependent methyltransferase; KEGG: vfi:VFA0955 hypothetical protein.
  
     0.485
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.