STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_3253PilD-dependent protein; KEGG: son:SO0852 type IV pilus assembly protein PilV. (138 aa)    
Predicted Functional Partners:
Ping_3252
Type IV pili fiber-building block protein; KEGG: son:SO0851 hypothetical protein.
  
  
 0.960
Ping_3255
Hypothetical protein containing methylation site; KEGG: csa:Csal_0493 methylation.
  
  
 0.911
Ping_3254
KEGG: son:SO0853 pilin, putative.
  
  
 0.863
Ping_3251
KEGG: son:SO0850 hypothetical protein.
  
  
 0.802
Ping_0294
KEGG: tbd:Tbd_1865 pilus assembly protein.
  
  
 0.626
Ping_0476
KEGG: shm:Shewmr7_3604 methylation site containing protein.
  
  
 0.626
Ping_0899
TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: pat:Patl_1779 DNA internalization-related competence protein ComEC/Rec2.
     
 0.438
Ping_0679
KEGG: vch:VC0858 type IV pilin, putative.
  
  
 0.427
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.