STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_3253PilD-dependent protein; KEGG: son:SO0852 type IV pilus assembly protein PilV. (138 aa)    
Predicted Functional Partners:
Ping_3252
Type IV pili fiber-building block protein; KEGG: son:SO0851 hypothetical protein.
  
  
 0.956
Ping_3255
Hypothetical protein containing methylation site; KEGG: csa:Csal_0493 methylation.
  
  
 0.917
Ping_3254
KEGG: son:SO0853 pilin, putative.
  
  
 0.864
Ping_3251
KEGG: son:SO0850 hypothetical protein.
  
  
 0.818
Ping_0294
KEGG: tbd:Tbd_1865 pilus assembly protein.
  
  
 0.648
Ping_0476
KEGG: shm:Shewmr7_3604 methylation site containing protein.
  
  
 0.648
Ping_0846
Hypothetical protein; KEGG: rso:RSc3188 putative hemagglutinin-related protein.
  
  
 0.431
Ping_0848
KEGG: sma:SAV4164 hypothetical protein.
  
  
 0.431
Ping_1782
gamma-D-glutamate-meso-diaminopimelate muropeptidase; KEGG: sma:SAV4164 hypothetical protein.
  
  
 0.431
Ping_2317
Hypothetical protein; KEGG: bte:BTH_II1774 serine protease, subtilase family.
  
  
 0.431
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.