STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_3349PFAM: iron-containing alcohol dehydrogenase; KEGG: cps:CPS_3111 alcohol dehydrogenase, iron-containing. (385 aa)    
Predicted Functional Partners:
mgsA
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
  
 
 0.905
Ping_2513
PFAM: iron-containing alcohol dehydrogenase; KEGG: sfx:S3258 putative oxidoreductase.
  
  
 
0.903
Ping_1645
PFAM: iron-containing alcohol dehydrogenase; KEGG: ppr:PBPRA2759 putative iron-containing alcohol dehydrogenase.
  
  
 
0.901
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
    0.783
Ping_3350
PFAM: ThiJ/PfpI domain protein; KEGG: cps:CPS_0933 ThiJ/PfpI family protein.
       0.572
Ping_3348
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; KEGG: cps:CPS_0931 oxidoreductase, zinc-binding.
       0.532
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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