STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_3425PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pub:SAR11_1297 glycine betaine/L-proline transport system permease. (686 aa)    
Predicted Functional Partners:
Ping_3426
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pub:SAR11_1298 glycine betaine/L-proline transport ATP-binding protein.
 
 0.995
Ping_3427
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pub:SAR11_1302 substrate-binding region of ABC-type glycine betaine transport system.
 
 
 0.988
Ping_0616
KEGG: vpa:VP1726 ABC superfamily (glycine/betaine/proline transport protein); TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase.
 
 0.981
Ping_2075
KEGG: hch:HCH_00854 ABC-type proline/glycine betaine transport system, ATPase component; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.981
Ping_2073
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: vpa:VPA1111 putative glycine betaine-binding ABC transporter.
 
 0.966
Ping_0614
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: vfi:VF0785 glycine betaine/L-proline-binding protein.
 
 
 0.953
Ping_0615
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vpa:VP1727 glycine betaine/L-proline transport system permease.
  
  
 
0.921
Ping_2074
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_00853 ABC-type proline/glycine betaine transport system, permease component.
  
  
 
0.919
Ping_0396
PFAM: permease YjgP/YjgQ family protein; KEGG: vch:VC2500 hypothetical protein.
     
  0.540
Ping_0397
PFAM: permease YjgP/YjgQ family protein; KEGG: sgl:SG2107 putative transport protein.
     
  0.540
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.