STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_3433KEGG: pha:PSHAa0505 hypothetical protein. (209 aa)    
Predicted Functional Partners:
Ping_2967
PFAM: outer membrane chaperone Skp (OmpH); KEGG: vfi:VF1953 outer membrane protein OmpH; Belongs to the skp family.
    
 
 0.811
Ping_0106
General secretion pathway M protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.709
Ping_0107
PFAM: type II secretion system protein N; KEGG: ppr:PBPRA3471 hypothetical general secretion pathway protein N.
  
     0.702
Ping_3432
Periplasmic protein conserved in bacteria with c-terminal histidine; PFAM: protein of unknown function DUF461; KEGG: tcx:Tcr_1566 protein of unknown function DUF461.
  
    0.697
bamC
NlpBDapX family lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
  
 0.696
Ping_0905
KEGG: cps:CPS_4187 putative ATP synthase F0, A subunit.
  
     0.682
Ping_1072
KEGG: cps:CPS_3192 hypothetical protein.
  
     0.666
Ping_0208
KEGG: pha:PSHAa2750 hypothetical protein.
  
     0.654
ftsN
Cell division protein FtsN; PFAM: Sporulation domain protein; KEGG: pat:Patl_4190 sporulation related.
  
    0.616
Ping_0101
KEGG: cps:CPS_4587 general secretion pathway protein H.
  
     0.614
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.