STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_3441PFAM: DsrH family protein; KEGG: ppr:PBPRA0312 putative uncharacterized protein involved in oxidation of intracellular sulfur. (96 aa)    
Predicted Functional Partners:
Ping_3442
PFAM: DsrE family protein; KEGG: pat:Patl_2453 DsrE-like protein; Belongs to the DsrF/TusC family.
 
 0.999
Ping_3443
PFAM: DsrE family protein; KEGG: yps:YPTB3708 putative uncharacterized protein involved in oxidation of intracellular sulfur.
 
 0.999
Ping_1471
Sulfur oxidation protein of DsrC family protein; Part of a sulfur-relay system.
 
 
 0.925
rpsL
SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy.
     
 0.511
tusA
Regulator of information in SirA family protein; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family.
 
   
 0.424
rpsG
SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.
       0.415
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.