STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_3442PFAM: DsrE family protein; KEGG: pat:Patl_2453 DsrE-like protein; Belongs to the DsrF/TusC family. (120 aa)    
Predicted Functional Partners:
Ping_3441
PFAM: DsrH family protein; KEGG: ppr:PBPRA0312 putative uncharacterized protein involved in oxidation of intracellular sulfur.
 
 0.999
Ping_3443
PFAM: DsrE family protein; KEGG: yps:YPTB3708 putative uncharacterized protein involved in oxidation of intracellular sulfur.
 
 0.999
Ping_1471
Sulfur oxidation protein of DsrC family protein; Part of a sulfur-relay system.
 
  
 0.899
tusA
Regulator of information in SirA family protein; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family.
 
   
 0.671
Ping_1084
PFAM: protein of unknown function DUF177; KEGG: ppr:PBPRA1190 conserved hypothetical protein.
  
     0.546
Ping_3444
TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: mta:Moth_1495 YjgF-like protein.
       0.496
rpsL
SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy.
       0.433
Ping_0954
PFAM: UspA domain protein; KEGG: ppr:PBPRB0088 putative universal stress protein A.
  
     0.425
rdgC
Putative exonuclease, RdgC; May be involved in recombination; Belongs to the RdgC family.
  
     0.411
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.