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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_3529Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pat:Patl_1436 transcriptional regulator, LysR family. (298 aa)    
Predicted Functional Partners:
Ping_2379
PFAM: regulatory protein, LysR; KEGG: vfi:VF2051 transcriptional regulators, LysR family.
  
     0.744
Ping_2130
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pcr:Pcryo_1817 transcriptional regulator, LysR family.
  
     0.635
Ping_3530
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: cps:CPS_0817 alcohol dehydrogenase, class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 
     0.618
Ping_2759
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sdn:Sden_2309 regulatory protein, LysR; Belongs to the LysR transcriptional regulatory family.
  
     0.616
Ping_2416
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: psb:Psyr_2268 regulatory protein, LysR:LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.606
Ping_3247
PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pha:PSHAb0105 putative transcriptional regulator (LysR family).
  
    0.606
ilvY
Transcriptional regulator IlvY, substrate-binding, LysR family protein; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sdn:Sden_3416 LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.603
Ping_3497
Transcriptional regulator, substrate-binding, LysR family protein; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ppr:PBPRA0273 putative Hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family.
  
     0.591
Ping_3660
PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: psp:PSPPH_0442 malonate utilization transcriptional regulator.
  
     0.578
Ping_3385
Transcriptional regulator, substrate-binding, LysR family protein; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sde:Sde_0637 metal dependent phosphohydrolase; Belongs to the LysR transcriptional regulatory family.
  
     0.556
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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