STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
metND-methionine ABC transporter, ATPase subunit; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (344 aa)    
Predicted Functional Partners:
Ping_3537
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppr:PBPRA2941 putative ABC-type metal ion transport system,permease component.
 0.999
Ping_3536
TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: ppr:PBPRA2942 putative lipoprotein YaeC; Belongs to the nlpA lipoprotein family.
 
 0.998
Ping_2332
ABC transporter ATP-binding and permease protein; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: gme:Gmet_3416 ABC transporter-related protein.
 
     
0.899
Ping_3708
ABC transporter permease protein; PFAM: protein of unknown function DUF214; KEGG: eba:ebA4058 putative ABC transporter protein.
 
      0.896
dppC
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA1471 putative dipeptide ABC transporter (permease).
 
    0.879
Ping_3454
KEGG: son:SO3780 ABC transporter, ATP-binding protein CydD; TIGRFAM: ABC transporter, transmembrane region, type 1; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase.
     
0.879
Ping_0564
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vfi:VF2516 dipeptide transport system permease protein DppC.
 
    0.809
metAS
Homoserine O-succinyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine; Belongs to the MetA family.
  
    0.761
Ping_0547
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vvy:VVA0134 peptide ABC transporter, permease protein.
 
    0.748
Ping_1289
KEGG: cps:CPS_0276 hypothetical protein.
   
  
 0.721
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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