STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_3541KEGG: sdn:Sden_0279 hypothetical protein. (181 aa)    
Predicted Functional Partners:
Ping_1735
KEGG: ppr:PBPRB1261 hypothetical protein.
  
    0.668
glmS
Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
   
    0.531
Ping_1015
PFAM: protein of unknown function DUF1458; KEGG: cps:CPS_0923 hypothetical protein.
   
    0.506
Ping_3540
PFAM: protein of unknown function DUF479; KEGG: vpa:VPA0844 hypothetical protein.
       0.486
Ping_3460
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpm:BURPS1710b_3159 polysaccharide ABC transporter, ATP-binding protein.
   
    0.474
Ping_0428
PFAM: polysaccharide export protein; KEGG: sde:Sde_0132 putative polysaccharide export protein, outer membrane.
   
    0.446
Ping_0763
PFAM: polysaccharide export protein; KEGG: vpa:VP0220 OtnA protein.
   
    0.446
Ping_3461
PFAM: ABC-2 type transporter; KEGG: pfl:PFL_5495 ABC-2 type transporte.
   
    0.440
Ping_1081
PFAM: Uncharacterized lipoprotein; KEGG: cps:CPS_0710 putative lipoprotein.
  
     0.432
asmA
PFAM: AsmA family protein; KEGG: son:SO2566 AsmA protein.
  
    0.425
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.