STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_3559Histidinol phosphatase; KEGG: vpa:VPA0275 putative flagellin. (342 aa)    
Predicted Functional Partners:
Ping_3558
Flagellar basal body P-ring biosynthesis protein-like protein; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.
       0.790
Ping_3560
Hypothetical protein.
       0.636
Ping_3561
Plasmid segregation actin-type ATPase ParM; PFAM: StbA family protein; KEGG: ppr:PBPRA0050 hypothetical StbA plasmid stable inheritance protein.
       0.636
Ping_3562
ATPase, FliI/YscN family protein; KEGG: vpa:VPA1533 putative flagellum-specific ATP synthase; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; SMART: AAA ATPase.
       0.636
Ping_3563
PFAM: flagellar assembly protein FliH; KEGG: ppr:PBPRA0024 hypothetical flagellar assembly protein.
       0.636
Ping_3564
PFAM: flagellar motor switch protein FliG; KEGG: vpa:VPA1535 puative flagellar motor switch protein.
       0.636
Ping_3565
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
       0.636
fliE
TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: vpa:VPA1537 putative flagellar hook-basal body complex protein.
       0.624
Ping_3568
TIGRFAM: flagellar hook-associated protein 3; KEGG: vpa:VPA0274 putative flagellar hook-associated protein.
  
 
 0.606
Ping_3567
PFAM: OmpA/MotB domain protein; KEGG: vpa:VPA1539 putative sodium-type flagellar protein MotY precursor.
   
   0.422
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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