STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliLFlagellar protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (148 aa)    
Predicted Functional Partners:
Ping_3580
PFAM: MotA/TolQ/ExbB proton channel; KEGG: ypa:YPA_3044 putative flagellar motor transmembrane channel protein.
       0.768
Ping_3581
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; PFAM: sigma-70 region 2 domain protein; KEGG: sdn:Sden_3633 RNA polymerase sigma factor, FliA/WhiG.
       0.768
Ping_3583
PFAM: flagellar hook-length control protein; KEGG: vpa:VPA1553 putative flagellar hook-length control protein FliK.
       0.727
Ping_3584
Hypothetical protein.
       0.727
Ping_3585
TIGRFAM: flagellar protein FliS; KEGG: sdn:Sden_3637 flagellar protein FliS.
       0.727
Ping_3586
Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
       0.727
Ping_3579
PFAM: OmpA/MotB domain protein; KEGG: ppr:PBPRA0049 hypothetical chemotaxis LafU protein.
       0.534
Ping_3587
Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
       0.415
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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