STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_3607PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: ppr:PBPRB1491 putative suppressor for copper-sensitivity B precursor. (734 aa)    
Predicted Functional Partners:
Ping_2293
PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: son:SO2100 thioredoxin family protein.
  
 
 0.891
Ping_3018
TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein; KEGG: vch:VC2051 thiol:disulfide interchange protein DsbE.
  
 
 0.891
Ping_3706
PFAM: Thioredoxin domain; KEGG: ilo:IL2069 thioredoxin related protein.
  
 
 0.891
Ping_0217
KEGG: vch:VCA0615 peptide methionine sulfoxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B.
   
 
 0.887
Ping_1119
Periplasmic thioredoxin of cytochrome c-type biogenesis.
  
 
 0.862
Ping_1829
KEGG: reu:Reut_B4599 thiol-disulfide isomerase and thioredoxins.
  
 
 0.862
Ping_1379
Thiol:disulfide interchange protein DsbA; PFAM: DSBA oxidoreductase; KEGG: ppr:PBPRA2149 hypothetical outer membrane protein.
 
 
 0.820
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 
 0.814
msrA-2
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 
 0.814
msrA-3
Methionine sulfoxide reductase A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 
 0.814
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.