STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_3701PFAM: regulatory protein, TetR; KEGG: pae:PA3034 probable transcriptional regulator. (206 aa)    
Predicted Functional Partners:
Ping_3700
PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: bur:Bcep18194_B2439 glutathione S-transferase-like.
 
     0.620
Ping_3427
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pub:SAR11_1302 substrate-binding region of ABC-type glycine betaine transport system.
  
     0.557
Ping_3425
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pub:SAR11_1297 glycine betaine/L-proline transport system permease.
  
     0.529
Ping_3182
Similar to RTX toxin; TIGRFAM: putative outer membrane adhesin like proteiin; KEGG: cch:Cag_1242 VCBS.
  
    0.421
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.