STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_3710ABC transporter foramino acid ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dar:Daro_3462 ABC transporter related. (229 aa)    
Predicted Functional Partners:
Ping_3708
ABC transporter permease protein; PFAM: protein of unknown function DUF214; KEGG: eba:ebA4058 putative ABC transporter protein.
 
 0.998
Ping_3709
ABC transporter permease protein; PFAM: protein of unknown function DUF214; KEGG: dar:Daro_3463 protein of unknown function DUF214.
 
 0.998
Ping_3711
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: eba:ebA4062 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.956
Ping_2195
KEGG: ppr:PBPRA2444 putative peptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
    
0.748
Ping_2201
TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: vfi:VFA0464 lipoprotein releasing system transmembrane protein LolE.
  
 
 0.717
Ping_2203
TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: ppr:PBPRA2390 putative ABC transporter integral membrane subunit.
  
 
 0.717
Ping_1579
ABC-type transporter protein; PFAM: protein of unknown function DUF214; KEGG: vvy:VV1432 ABC-type antimicrobial peptide transport system, permease component.
  
 
 0.695
Ping_3688
ABC transporter for phosphonate ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tcx:Tcr_2086 ABC transporter related.
 
    
0.634
lolA
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.608
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
 
 
 
 0.582
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.