STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ88530.1PFAM: conserved hypothetical protein 374. (350 aa)    
Predicted Functional Partners:
ABQ88529.1
PFAM: amine oxidase; FAD dependent oxidoreductase.
 
    0.940
ABQ88528.1
Hypothetical protein.
       0.773
ABQ89857.1
Hypothetical protein.
  
     0.700
ABQ89078.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
 
    0.699
ABQ89079.1
Uncharacterized membrane protein-like protein.
 
    0.656
ABQ91366.1
Hypothetical protein.
  
    0.649
ABQ92781.1
PFAM: 4-vinyl reductase, 4VR.
  
     0.642
ABQ88679.1
PFAM: glycosyl transferase, family 39.
  
     0.637
ABQ88678.1
PFAM: NHL repeat containing protein; SMART: low-density lipoprotein receptor, YWTD repeat.
 
    0.621
ABQ92313.1
PFAM: PfkB domain protein.
 
     0.613
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.