STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ88615.1TIGRFAM: transcriptional regulator, AbrB family; PFAM: ABC transporter related; SpoVT/AbrB domain protein; SMART: AAA ATPase. (328 aa)    
Predicted Functional Partners:
ABQ88614.1
PFAM: protein of unknown function DUF214.
 
 
 0.997
ABQ91777.1
PFAM: protein of unknown function DUF214.
 
 
 0.989
ABQ92111.1
PFAM: protein of unknown function DUF214.
 
 0.971
ABQ88704.1
PFAM: protein of unknown function DUF214.
 
 0.949
ABQ89610.1
PFAM: protein of unknown function DUF214.
 
 
 0.896
ABQ88613.1
Secretion protein HlyD family protein; PFAM: H+-transporting two-sector ATPase, delta/epsilon subunit; secretion protein HlyD family protein.
 
 
 0.851
ABQ88616.1
PFAM: ABC transporter related; SMART: AAA ATPase.
 
    
0.832
ABQ90696.1
PFAM: protein of unknown function DUF214.
 
 
 0.829
ABQ89484.1
PFAM: protein of unknown function DUF214.
 
 
 0.800
ABQ91182.1
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
    
0.732
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.