STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ88809.1PFAM: Methyltransferase type 11; Methyltransferase type 12. (251 aa)    
Predicted Functional Partners:
ABQ88810.1
Hypothetical protein.
       0.493
ABQ88811.1
Conserved hypothetical protein.
       0.493
ABQ89842.1
Hypothetical protein.
  
    0.480
ABQ89424.1
Transcriptional regulator, SARP family; PFAM: TPR repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
  
     0.465
ABQ88807.1
Hypothetical protein.
       0.449
ABQ88808.1
Hypothetical protein.
       0.449
ABQ91435.1
Hypothetical protein.
  
     0.437
ABQ89823.1
Transcriptional modulator of MazE/toxin, MazF; PFAM: PemK family protein.
  
     0.432
ABQ91514.1
PFAM: Allergen V5/Tpx-1 family protein.
  
     0.420
ABQ91287.1
PFAM: protein of unknown function DUF323.
  
     0.412
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.