STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ89009.1PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5. (316 aa)    
Predicted Functional Partners:
ABQ89008.1
PFAM: protein of unknown function DUF58.
 
  
 0.824
ABQ89010.1
PFAM: beta-lactamase domain protein.
       0.768
ABQ91509.1
PFAM: transglutaminase domain protein.
 
   
 0.691
ABQ88747.1
PFAM: transglutaminase domain protein.
 
   
 0.644
ABQ91521.1
PFAM: protein of unknown function DUF58.
 
  
 0.607
ABQ89007.1
Hypothetical protein.
       0.479
ABQ91647.1
PFAM: protein of unknown function DUF58.
 
  
 0.449
ABQ90225.1
PFAM: protein of unknown function DUF58.
 
  
 0.440
ABQ90278.1
PFAM: protein of unknown function DUF58.
 
  
 0.428
ABQ91076.1
Conserved hypothetical protein.
 
  
 0.428
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.