node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABQ89020.1 | ABQ89640.1 | RoseRS_0598 | RoseRS_1235 | Putative cold-shock DNA-binding domain protein. | Putative transmembrane anti-sigma factor. | 0.599 |
ABQ89020.1 | ABQ91881.1 | RoseRS_0598 | RoseRS_3523 | Putative cold-shock DNA-binding domain protein. | PFAM: ribosomal protein L28. | 0.725 |
ABQ89020.1 | rplC | RoseRS_0598 | RoseRS_1185 | Putative cold-shock DNA-binding domain protein. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.523 |
ABQ89020.1 | rplS | RoseRS_0598 | RoseRS_2781 | Putative cold-shock DNA-binding domain protein. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.547 |
ABQ89020.1 | rplT | RoseRS_0598 | RoseRS_1034 | Putative cold-shock DNA-binding domain protein. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.578 |
ABQ89020.1 | rpmA | RoseRS_0598 | RoseRS_2696 | Putative cold-shock DNA-binding domain protein. | PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.562 |
ABQ89020.1 | rpoA | RoseRS_0598 | RoseRS_1158 | Putative cold-shock DNA-binding domain protein. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.554 |
ABQ89020.1 | rpoB | RoseRS_0598 | RoseRS_1265 | Putative cold-shock DNA-binding domain protein. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.573 |
ABQ89020.1 | rpsG | RoseRS_0598 | RoseRS_1189 | Putative cold-shock DNA-binding domain protein. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.513 |
ABQ89020.1 | rpsL | RoseRS_0598 | RoseRS_1190 | Putative cold-shock DNA-binding domain protein. | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. | 0.547 |
ABQ89640.1 | ABQ89020.1 | RoseRS_1235 | RoseRS_0598 | Putative transmembrane anti-sigma factor. | Putative cold-shock DNA-binding domain protein. | 0.599 |
ABQ91881.1 | ABQ89020.1 | RoseRS_3523 | RoseRS_0598 | PFAM: ribosomal protein L28. | Putative cold-shock DNA-binding domain protein. | 0.725 |
ABQ91881.1 | rplC | RoseRS_3523 | RoseRS_1185 | PFAM: ribosomal protein L28. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.977 |
ABQ91881.1 | rplS | RoseRS_3523 | RoseRS_2781 | PFAM: ribosomal protein L28. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.978 |
ABQ91881.1 | rplT | RoseRS_3523 | RoseRS_1034 | PFAM: ribosomal protein L28. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.975 |
ABQ91881.1 | rpmA | RoseRS_3523 | RoseRS_2696 | PFAM: ribosomal protein L28. | PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.978 |
ABQ91881.1 | rpoA | RoseRS_3523 | RoseRS_1158 | PFAM: ribosomal protein L28. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.897 |
ABQ91881.1 | rpoB | RoseRS_3523 | RoseRS_1265 | PFAM: ribosomal protein L28. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.638 |
ABQ91881.1 | rpsG | RoseRS_3523 | RoseRS_1189 | PFAM: ribosomal protein L28. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.978 |
ABQ91881.1 | rpsL | RoseRS_3523 | RoseRS_1190 | PFAM: ribosomal protein L28. | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. | 0.978 |