STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ89076.1PFAM: Tetratricopeptide TPR_2 repeat protein. (435 aa)    
Predicted Functional Partners:
ABQ89077.1
Hypothetical protein.
 
    
0.848
ABQ89671.1
Hypothetical protein.
  
     0.774
ABQ90041.1
Hypothetical protein.
  
     0.774
ABQ91324.1
Hypothetical protein.
  
     0.774
ABQ92662.1
Hypothetical protein.
  
     0.774
ABQ89682.1
Hypothetical protein.
  
     0.773
ABQ91031.1
Hypothetical protein.
  
     0.773
ABQ90741.1
Hypothetical protein.
  
     0.772
ABQ90465.1
Hypothetical protein.
  
     0.771
ABQ88560.1
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein.
  
     0.770
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.