STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ89111.1PFAM: protein of unknown function DUF433. (88 aa)    
Predicted Functional Partners:
ABQ89112.1
Hypothetical protein.
 
   
 0.945
ABQ90869.1
PFAM: protein of unknown function DUF433.
  
     0.772
ABQ89091.1
PFAM: protein of unknown function DUF433.
  
     0.770
ABQ90451.1
PFAM: protein of unknown function DUF433.
  
     0.730
ABQ89074.1
PFAM: protein of unknown function DUF433.
  
     0.599
ABQ89073.1
Hypothetical protein.
 
   
 0.519
ABQ89092.1
Hypothetical protein.
 
   
 0.501
ABQ88463.1
Hypothetical protein.
  
     0.493
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
       0.450
ABQ90263.1
PFAM: protein of unknown function UPF0150.
  
     0.402
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.