STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ89144.1PFAM: protein of unknown function DUF820. (343 aa)    
Predicted Functional Partners:
ABQ91502.1
Hypothetical protein.
  
     0.770
ABQ92216.1
PFAM: Laminin G, sub domain 2; SMART: Laminin G; LamG domain protein jellyroll fold domain protein.
  
     0.770
ABQ92260.1
Hypothetical protein.
  
     0.764
ABQ89818.1
Hypothetical protein.
  
     0.759
ABQ92123.1
Hypothetical protein.
  
     0.758
ABQ91435.1
Hypothetical protein.
  
     0.754
ABQ91385.1
Hypothetical protein.
  
     0.753
ABQ89438.1
Hypothetical protein.
  
     0.749
ABQ89439.1
Hypothetical protein.
  
     0.746
ABQ90095.1
Hypothetical protein.
  
     0.743
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.