STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ89149.1PFAM: transposase IS200-family protein. (137 aa)    
Predicted Functional Partners:
ABQ88674.1
Hypothetical protein.
 
     0.560
ABQ91241.1
Hypothetical protein.
  
     0.472
ABQ91242.1
Hypothetical protein.
  
     0.468
ABQ91495.1
Hypothetical protein.
  
     0.455
ABQ92808.1
PFAM: metal-dependent phosphohydrolase, HD sub domain.
  
     0.449
ABQ90329.1
Hypothetical protein.
  
     0.421
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.