STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ89209.1PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (352 aa)    
Predicted Functional Partners:
ABQ90672.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 0.972
ABQ90673.1
PFAM: extracellular solute-binding protein, family 1.
 
 
 0.955
ABQ90034.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 0.940
ABQ90037.1
PFAM: extracellular solute-binding protein, family 1.
 
  
 0.899
ABQ90036.1
Ornithine carbamoyltransferase; PFAM: binding-protein-dependent transport systems inner membrane component.
 
  
 0.893
ABQ89205.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
  
 0.712
ABQ90187.1
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.687
ABQ89207.1
ABC-type Fe3+ transport system periplasmic component-like protein.
 
  
 0.609
murE
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan; Belongs to the MurCDEF family. MurE subfamily.
  
    0.590
ABQ90856.1
PFAM: ABC-2 type transporter.
 
   
  0.524
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.