Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABQ88923.1 | ABQ89243.1 | RoseRS_0499 | RoseRS_0829 | PFAM: Myo-inositol catabolism IolB domain protein. | PFAM: aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.503 |
ABQ88923.1 | ABQ91565.1 | RoseRS_0499 | RoseRS_3204 | PFAM: Myo-inositol catabolism IolB domain protein. | PFAM: aldehyde dehydrogenase. | 0.503 |
ABQ88923.1 | ABQ92536.1 | RoseRS_0499 | RoseRS_4193 | PFAM: Myo-inositol catabolism IolB domain protein. | PFAM: aldehyde dehydrogenase. | 0.503 |
ABQ89050.1 | ABQ89243.1 | RoseRS_0628 | RoseRS_0829 | Coenzyme F390 synthetase-like protein. | PFAM: aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.606 |
ABQ89050.1 | ABQ89620.1 | RoseRS_0628 | RoseRS_1213 | Coenzyme F390 synthetase-like protein. | PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. | 0.423 |
ABQ89050.1 | ABQ91273.1 | RoseRS_0628 | RoseRS_2905 | Coenzyme F390 synthetase-like protein. | PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; XYPPX repeat-containing protein; phosphopantetheine-binding; KR. | 0.514 |
ABQ89050.1 | ABQ91563.1 | RoseRS_0628 | RoseRS_3202 | Coenzyme F390 synthetase-like protein. | PFAM: AMP-dependent synthetase and ligase; Enoyl-CoA hydratase/isomerase; Alcohol dehydrogenase GroES domain protein. | 0.469 |
ABQ89050.1 | ABQ91565.1 | RoseRS_0628 | RoseRS_3204 | Coenzyme F390 synthetase-like protein. | PFAM: aldehyde dehydrogenase. | 0.606 |
ABQ89050.1 | ABQ92536.1 | RoseRS_0628 | RoseRS_4193 | Coenzyme F390 synthetase-like protein. | PFAM: aldehyde dehydrogenase. | 0.606 |
ABQ89243.1 | ABQ88923.1 | RoseRS_0829 | RoseRS_0499 | PFAM: aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | PFAM: Myo-inositol catabolism IolB domain protein. | 0.503 |
ABQ89243.1 | ABQ89050.1 | RoseRS_0829 | RoseRS_0628 | PFAM: aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Coenzyme F390 synthetase-like protein. | 0.606 |
ABQ89243.1 | ABQ89244.1 | RoseRS_0829 | RoseRS_0830 | PFAM: aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Hypothetical protein. | 0.532 |
ABQ89243.1 | ABQ89620.1 | RoseRS_0829 | RoseRS_1213 | PFAM: aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. | 0.531 |
ABQ89243.1 | ABQ91273.1 | RoseRS_0829 | RoseRS_2905 | PFAM: aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; XYPPX repeat-containing protein; phosphopantetheine-binding; KR. | 0.515 |
ABQ89243.1 | ABQ91349.1 | RoseRS_0829 | RoseRS_2985 | PFAM: aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase. | 0.487 |
ABQ89243.1 | ABQ91563.1 | RoseRS_0829 | RoseRS_3202 | PFAM: aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | PFAM: AMP-dependent synthetase and ligase; Enoyl-CoA hydratase/isomerase; Alcohol dehydrogenase GroES domain protein. | 0.677 |
ABQ89243.1 | ABQ91565.1 | RoseRS_0829 | RoseRS_3204 | PFAM: aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | PFAM: aldehyde dehydrogenase. | 0.928 |
ABQ89243.1 | ABQ91846.1 | RoseRS_0829 | RoseRS_3488 | PFAM: aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | TIGRFAM: citrate synthase I; PFAM: Citrate synthase; Belongs to the citrate synthase family. | 0.483 |
ABQ89243.1 | ABQ92536.1 | RoseRS_0829 | RoseRS_4193 | PFAM: aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | PFAM: aldehyde dehydrogenase. | 0.911 |
ABQ89244.1 | ABQ89243.1 | RoseRS_0830 | RoseRS_0829 | Hypothetical protein. | PFAM: aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.532 |
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