STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ89303.1Hypothetical protein. (365 aa)    
Predicted Functional Partners:
ABQ90253.1
Hypothetical protein.
  
     0.677
ABQ89042.1
Hypothetical protein.
 
     0.658
ABQ90252.1
PFAM: regulatory protein, LuxR; Sigma-70, region 4 type 2.
  
     0.612
ABQ89732.1
PFAM: NUDIX hydrolase.
  
     0.593
ABQ91064.1
Hypothetical protein.
 
     0.590
ABQ89399.1
PFAM: zinc finger, SWIM domain protein.
  
     0.562
ABQ89304.1
Hypothetical protein.
       0.550
ABQ90957.1
PFAM: TPR repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein.
  
     0.521
ABQ89872.1
Hypothetical protein.
  
     0.501
ABQ89761.1
Hypothetical protein.
  
     0.489
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.