STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ89316.1Sterol 3-beta-glucosyltransferase; PFAM: glycosyl transferase, family 28. (416 aa)    
Predicted Functional Partners:
ABQ89181.1
PFAM: cytochrome P450.
 
 
 0.909
ABQ89317.1
Fe(II) trafficking protein YggX; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.
       0.789
ABQ91273.1
PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; XYPPX repeat-containing protein; phosphopantetheine-binding; KR.
  
  
 0.697
ABQ89318.1
PFAM: alanine dehydrogenase/PNT domain protein.
       0.534
ABQ89319.1
Hypothetical protein.
       0.491
ABQ89320.1
PFAM: acetyl-CoA hydrolase/transferase.
       0.491
ABQ91867.1
PFAM: Terpene synthase, metal-binding domain protein.
  
     0.479
ABQ88607.1
Hypothetical protein.
   
  
 0.476
ABQ89942.1
PFAM: Rare lipoprotein A.
  
     0.441
ABQ91022.1
Hypothetical protein.
  
     0.434
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.