STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ89433.1PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase. (668 aa)    
Predicted Functional Partners:
ABQ89434.1
Hypothetical protein.
       0.814
ABQ88510.1
PFAM: transposase, IS4 family protein.
  
     0.756
ABQ88568.1
PFAM: peptidase C14, caspase catalytic subunit p20; Tetratricopeptide TPR_4.
  
     0.711
ABQ89732.1
PFAM: NUDIX hydrolase.
  
     0.701
ABQ89716.1
AAA-4 family protein; PFAM: PHP C-terminal domain protein; AAA-4 family protein; SMART: phosphoesterase PHP domain protein.
 
    0.665
ABQ92688.1
Hypothetical protein.
 
   
 0.660
ABQ92266.1
Hypothetical protein.
  
     0.605
ABQ89553.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
 
     0.604
ABQ89431.1
Hypothetical protein.
       0.601
ABQ89432.1
Hypothetical protein.
       0.601
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.