STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ89704.1PFAM: membrane-flanked domain. (219 aa)    
Predicted Functional Partners:
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
       0.821
ABQ89703.1
Inosine guanosine and xanthosine phosphorylase family; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
       0.802
ABQ88450.1
Hypothetical protein.
  
     0.737
ABQ88449.1
Hypothetical protein.
  
     0.713
ABQ89857.1
Hypothetical protein.
  
     0.643
ABQ90018.1
Conserved hypothetical protein.
  
    0.597
ABQ90522.1
TIGRFAM: small GTP-binding protein; PFAM: protein of unknown function, ATP binding; Miro domain protein.
  
     0.587
ABQ92268.1
PFAM: protein of unknown function, ATP binding; Miro domain protein.
  
     0.581
ABQ89689.1
PFAM: protein of unknown function DUF95, transmembrane; ABC-2 type transporter.
  
     0.580
ABQ92782.1
N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)-like protein.
  
     0.567
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.