STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ89721.1PFAM: ABC transporter related; SMART: AAA ATPase. (525 aa)    
Predicted Functional Partners:
ABQ89722.1
PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
ABQ89723.1
PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
ABQ89724.1
PFAM: basic membrane lipoprotein.
 
 
 0.995
ABQ91420.1
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
     0.514
ABQ91099.1
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
     0.503
ABQ91100.1
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
     0.439
ABQ92729.1
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
 
  
 0.438
ABQ91419.1
PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
     0.420
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.