Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABQ89139.1 | ABQ89747.1 | RoseRS_0723 | RoseRS_1344 | PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein. | TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin. | 0.433 |
ABQ89139.1 | ABQ90492.1 | RoseRS_0723 | RoseRS_2111 | PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein. | TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; Belongs to the HesB/IscA family. | 0.403 |
ABQ89746.1 | ABQ89747.1 | RoseRS_1343 | RoseRS_1344 | PFAM: peptidase M23B. | TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin. | 0.494 |
ABQ89746.1 | groS-3 | RoseRS_1343 | RoseRS_1345 | PFAM: peptidase M23B. | Chaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.429 |
ABQ89747.1 | ABQ89139.1 | RoseRS_1344 | RoseRS_0723 | TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin. | PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein. | 0.433 |
ABQ89747.1 | ABQ89746.1 | RoseRS_1344 | RoseRS_1343 | TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin. | PFAM: peptidase M23B. | 0.494 |
ABQ89747.1 | ABQ90492.1 | RoseRS_1344 | RoseRS_2111 | TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin. | TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; Belongs to the HesB/IscA family. | 0.542 |
ABQ89747.1 | ABQ91469.1 | RoseRS_1344 | RoseRS_3106 | TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin. | PFAM: glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.416 |
ABQ89747.1 | groS-3 | RoseRS_1344 | RoseRS_1345 | TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin. | Chaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.685 |
ABQ89747.1 | msrA | RoseRS_1344 | RoseRS_3364 | TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin. | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.828 |
ABQ90492.1 | ABQ89139.1 | RoseRS_2111 | RoseRS_0723 | TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; Belongs to the HesB/IscA family. | PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein. | 0.403 |
ABQ90492.1 | ABQ89747.1 | RoseRS_2111 | RoseRS_1344 | TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; Belongs to the HesB/IscA family. | TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin. | 0.542 |
ABQ91469.1 | ABQ89747.1 | RoseRS_3106 | RoseRS_1344 | PFAM: glutathione peroxidase; Belongs to the glutathione peroxidase family. | TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin. | 0.416 |
groS-3 | ABQ89746.1 | RoseRS_1345 | RoseRS_1343 | Chaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | PFAM: peptidase M23B. | 0.429 |
groS-3 | ABQ89747.1 | RoseRS_1345 | RoseRS_1344 | Chaperonin Cpn10; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin. | 0.685 |
msrA | ABQ89747.1 | RoseRS_3364 | RoseRS_1344 | Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin. | 0.828 |