STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ89858.1FHA domain containing protein; PFAM: Forkhead-associated protein. (173 aa)    
Predicted Functional Partners:
ABQ91005.1
PFAM: protein of unknown function RIO1; protein kinase; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase.
   
 
 0.857
ABQ89857.1
Hypothetical protein.
       0.805
ABQ89859.1
PFAM: von Willebrand factor, type A.
 
     0.740
ABQ89861.1
PFAM: protein kinase; Pyrrolo-quinoline quinone; SMART: tyrosine protein kinase; serine/threonine protein kinase.
 
 
   0.578
ABQ89860.1
PFAM: protein phosphatase 2C domain protein.
 
   0.574
ABQ91349.1
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase.
  
 
   0.552
ABQ91754.1
TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase, E1 component; Transketolase, central region.
    
 
 0.510
ABQ90171.1
FHA domain containing protein; PFAM: Forkhead-associated protein.
  
     0.505
ABQ91475.1
TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; Proprotein convertase, P.
 
    0.499
ABQ88504.1
Hypothetical protein.
  
    0.456
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.