STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ89988.1PFAM: RDD domain containing protein. (258 aa)    
Predicted Functional Partners:
ABQ92155.1
PFAM: protein of unknown function DUF95, transmembrane.
    0.951
ABQ90225.1
PFAM: protein of unknown function DUF58.
 
    0.793
ABQ91544.1
PFAM: protein of unknown function DUF11; protein of unknown function DUF58.
 
    0.629
ABQ90222.1
Hypothetical protein.
  
     0.566
ABQ89989.1
PFAM: Allergen V5/Tpx-1 family protein.
  
    0.562
ABQ90221.1
Hypothetical protein.
  
     0.526
ABQ92839.1
PFAM: protein of unknown function UPF0027.
  
     0.457
ABQ89859.1
PFAM: von Willebrand factor, type A.
  
     0.427
ABQ91740.1
PFAM: von Willebrand factor, type A.
  
     0.425
ABQ89987.1
TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein.
  
    0.424
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.