STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ90018.1Conserved hypothetical protein. (361 aa)    
Predicted Functional Partners:
ABQ92067.1
Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.704
ABQ92066.1
Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.682
ABQ92384.1
Hypothetical protein.
  
     0.660
ABQ90002.1
PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: Animal peptidoglycan recognition protein PGRP.
  
     0.658
ABQ92623.1
PFAM: peptidase C60, sortase A and B.
  
     0.658
ABQ91554.1
Hypothetical protein.
  
     0.652
ABQ92460.1
PFAM: Allergen V5/Tpx-1 family protein.
  
     0.652
ABQ91028.1
Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.646
ABQ89156.1
Hypothetical protein.
  
     0.624
ABQ92338.1
Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.624
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.