STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ90057.1PFAM: GPW/gp25 family protein. (130 aa)    
Predicted Functional Partners:
ABQ90049.1
PFAM: phage tail sheath protein.
 
 
 0.997
ABQ90058.1
Hypothetical protein.
 
 
 0.997
ABQ90054.1
Hypothetical protein.
 
   0.996
ABQ90059.1
FHA domain containing protein; TIGRFAM: phage tail protein; PFAM: Forkhead-associated protein.
 
 
 0.995
ABQ90052.1
TIGRFAM: conserved hypothetical phage tail protein.
 
   0.991
ABQ90050.1
TIGRFAM: conserved hypothetical phage tail protein.
 
   0.977
ABQ90055.1
PFAM: Rhs element Vgr protein.
 
  
 0.964
ABQ90056.1
PFAM: PAAR repeat-containing protein.
 
    0.946
ABQ90051.1
Hypothetical protein.
 
     0.878
ABQ90046.1
PFAM: Peptidoglycan-binding domain 1 protein.
 
    0.851
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.