STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
bchLLight-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. (273 aa)    
Predicted Functional Partners:
bchB
Light-independent protochlorophyllide reductase, B subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
 
 0.999
bchN
Light-independent protochlorophyllide reductase, N subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
 
 0.999
ABQ91617.1
TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase, component 1; protein of unknown function DUF1197.
  
 
 0.988
ABQ91623.1
PFAM: 2-vinyl bacteriochlorophyllide hydratase.
 
 
 0.981
ABQ91618.1
TIGRFAM: chlorophyllide reductase subunit Y; PFAM: oxidoreductase/nitrogenase, component 1.
  
 
 0.977
ABQ91627.1
TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase.
 
 
 0.976
ABQ89605.1
Nitrogenase; PFAM: oxidoreductase/nitrogenase, component 1.
 
 
 0.968
ABQ89606.1
TIGRFAM: nitrogenase alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase, component 1; Belongs to the NifD/NifK/NifE/NifN family.
 
 
 0.968
ABQ91621.1
TIGRFAM: chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein; Belongs to the NifH/BchL/ChlL family.
  
 
0.955
ABQ89349.1
TIGRFAM: bacteriochlorophyll 4-vinyl reductase; PFAM: 4-vinyl reductase, 4VR.
 
 
 0.950
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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