STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ90388.1PFAM: GCN5-related N-acetyltransferase. (182 aa)    
Predicted Functional Partners:
ABQ89811.1
Hypothetical protein.
 
     0.757
ABQ91118.1
Hypothetical protein.
 
     0.749
ABQ91865.1
PFAM: protein of unknown function DUF6, transmembrane.
 
    0.741
ABQ92640.1
Hypothetical protein.
  
     0.715
ABQ92208.1
PFAM: band 7 protein.
  
     0.708
ABQ91000.1
PFAM: cyclic nucleotide-binding; peptidase M50.
  
    0.706
ABQ91295.1
Hypothetical protein.
  
     0.700
ABQ91031.1
Hypothetical protein.
  
     0.695
ABQ90581.1
ATPase involved in chromosome partitioning-like protein.
  
     0.689
ABQ91174.1
Chromosome segregation ATPase-like protein.
 
     0.688
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.