STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ90508.1Uncharacterized metal-binding protein-like protein. (190 aa)    
Predicted Functional Partners:
ABQ90095.1
Hypothetical protein.
  
    0.694
ABQ90510.1
Hypothetical protein.
 
     0.690
ABQ90509.1
Hypothetical protein.
       0.689
ABQ91384.1
Transcriptional regulator-like protein.
  
     0.686
ABQ89435.1
Hypothetical protein.
  
     0.676
ABQ92063.1
PFAM: protein of unknown function DUF820.
  
     0.639
ABQ92065.1
PFAM: protein of unknown function DUF820.
  
     0.634
ABQ92064.1
PFAM: protein of unknown function DUF820.
  
     0.630
ABQ92479.1
PFAM: protein of unknown function DUF820.
  
     0.617
ABQ89327.1
PFAM: protein of unknown function DUF820.
  
     0.616
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.