STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ90520.1PFAM: protein of unknown function DUF1385. (313 aa)    
Predicted Functional Partners:
prmC
Modification methylase, HemK family; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
      0.868
ABQ90521.1
Hypothetical protein.
       0.735
ABQ90522.1
TIGRFAM: small GTP-binding protein; PFAM: protein of unknown function, ATP binding; Miro domain protein.
       0.633
ABQ89831.1
PFAM: Arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.
   
    0.583
ABQ91371.1
Agmatinase; TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.
   
    0.583
ABQ92481.1
Arginase; TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.
   
    0.583
ABQ90519.1
Hypothetical protein.
       0.570
ABQ90523.1
Hypothetical protein.
       0.470
ABQ90524.1
PFAM: beta-lactamase domain protein.
       0.434
ABQ90518.1
Hypothetical protein.
       0.427
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.