STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ90547.1Hypothetical protein. (304 aa)    
Predicted Functional Partners:
ABQ90546.1
PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase.
       0.543
ABQ90545.1
PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor, type A.
       0.497
ABQ91905.1
PFAM: membrane protein of unknown function.
  
    0.450
ABQ88946.1
Phage shock protein C, PspC; PFAM: PspC domain protein.
  
    0.408
ABQ90729.1
Phage shock protein C, PspC; PFAM: PspC domain protein.
  
    0.408
ABQ90832.1
Phage shock protein C, PspC; PFAM: PspC domain protein.
  
    0.408
ABQ92285.1
Phage shock protein C, PspC; PFAM: PspC domain protein.
  
    0.408
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.