STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ90648.1Hypothetical protein. (193 aa)    
Predicted Functional Partners:
ABQ88604.1
Aminotransferase, class V; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
  
  
 0.826
ABQ90647.1
PFAM: Cupin 2, conserved barrel domain protein.
  
    0.570
ABQ89127.1
TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein.
  
  
 0.543
ABQ89135.1
PFAM: nitrogen-fixing NifU domain protein.
  
  
 0.543
ABQ89620.1
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
  
  
 0.496
ABQ89999.1
Conserved hypothetical protein.
  
     0.476
ABQ91111.1
Membrane protein-like protein.
  
     0.466
ABQ92361.1
PFAM: Abortive infection protein.
 
     0.466
ABQ88815.1
PFAM: band 7 protein.
 
     0.424
ABQ92781.1
PFAM: 4-vinyl reductase, 4VR.
 
    0.422
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.