STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ90662.1TIGRFAM: polymorphic outer membrane protein; PFAM: Polymorphic membrane protein, Chlamydia. (575 aa)    
Predicted Functional Partners:
ABQ91475.1
TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; Proprotein convertase, P.
 
 
 0.898
ABQ89477.1
TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; Cna B domain protein.
 
   
 0.649
ABQ88746.1
Hypothetical protein.
  
     0.643
ABQ92633.1
PFAM: Cna B domain protein.
 
   
 0.643
ABQ89673.1
PFAM: PA14 domain protein; TadE family protein; SMART: PA14-related domain protein.
  
     0.622
ABQ89238.1
4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein.
  
     0.601
ABQ90064.1
PFAM: Forkhead-associated protein; Na-Ca exchanger/integrin-beta4.
 
     0.594
ABQ92952.1
SMART: Integrin alpha beta-propellor repeat protein.
  
     0.593
ABQ88841.1
PFAM: glycosyl transferase, family 39.
  
     0.592
ABQ92238.1
Hypothetical protein.
 
     0.591
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.